STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26905Uncharacterized protein. (423 aa)    
Predicted Functional Partners:
T459_02348
NB-ARC domain-containing protein.
  
     0.504
T459_13293
Uncharacterized protein.
  
    0.500
T459_20803
F-box domain-containing protein.
  
  
  0.492
T459_10640
F-box domain-containing protein.
  
     0.484
T459_28416
GUB_WAK_bind domain-containing protein.
  
     0.481
T459_16092
EGF-like domain-containing protein.
  
     0.472
T459_24866
NB-ARC domain-containing protein.
  
     0.463
T459_26577
DUF4005 domain-containing protein.
  
     0.461
T459_24107
NB-ARC domain-containing protein.
  
     0.458
T459_18288
Uncharacterized protein.
  
     0.446
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.