STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_2761040S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (79 aa)    
Predicted Functional Partners:
T459_10368
40S ribosomal protein S19.
   
 0.997
T459_09903
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.996
T459_00946
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.995
T459_32756
40S ribosomal protein S28.
  
 0.993
T459_34103
40S ribosomal protein S10.
   
 0.993
T459_31210
40S ribosomal protein S10.
   
 0.993
T459_26443
40S ribosomal protein S28.
  
 0.993
T459_15952
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.993
T459_14201
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.993
T459_22109
40S ribosomal protein S20.
  
 0.992
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.