STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_27852D-lactate dehydrogenase [cytochrome], mitochondrial. (446 aa)    
Predicted Functional Partners:
T459_10042
Malate synthase; Belongs to the malate synthase family.
  
 
 0.705
T459_10041
Malate synthase; Belongs to the malate synthase family.
  
 
 0.705
T459_16336
Hydroxyacylglutathione hydrolase, mitochondrial.
    
 0.635
T459_05887
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
   
 
 0.621
T459_07825
Electron transfer flavoprotein subunit beta, mitochondrial.
  
 
 0.598
T459_08975
Electron transfer flavoprotein subunit alpha, mitochondrial.
  
 
 0.598
T459_10282
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
    
 0.562
T459_00967
Plastidal glycolate/glycerate translocator 1, chloroplastic.
     
 0.555
T459_22463
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic; Belongs to the FPP/GGPP synthase family.
      
 0.544
PEX7
Peroxisome biogenesis protein 7.
     
 0.539
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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