Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T459_28259Uncharacterized protein. (226 aa)    
Predicted Functional Partners:
T459_19879
Protein disulfide-isomerase like 2-2; Belongs to the protein disulfide isomerase family.
   
 0.902
T459_00943
Protein disulfide-isomerase.
   
 0.880
T459_33662
Uncharacterized protein; Belongs to the protein disulfide isomerase family.
    
 0.877
T459_10926
Protein disulfide isomerase-like 1-5.
   
 0.876
T459_11843
Protein disulfide-isomerase 5-2.
   
 0.873
T459_28776
Protein disulfide-isomerase.
   
 0.873
T459_17197
Protein disulfide-isomerase 5-2.
   
 0.873
T459_16875
Protein disulfide-isomerase.
   
 0.840
T459_19660
Protein disulfide-isomerase.
   
 0.840
T459_28183
Uncharacterized protein.
   
 0.839
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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