STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_25646Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
T459_10711
Uncharacterized protein.
  
 0.867
T459_14083
Transaldolase 2.
  
 0.826
T459_08910
Uncharacterized protein.
  
 0.826
T459_08926
Uncharacterized protein.
  
 0.826
T459_12781
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.780
T459_12382
Uncharacterized protein.
  
 
 0.780
T459_08743
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.780
T459_22245
DNA-damage-repair/toleration protein.
  
 
 0.701
T459_20627
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
 
 0.692
T459_24712
Putative bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1.
  
 
 0.692
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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