STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26201Late blight resistance protein R1-A; Belongs to the disease resistance NB-LRR family. (1244 aa)    
Predicted Functional Partners:
T459_09513
Uncharacterized protein.
  
     0.482
T459_26260
F-box domain-containing protein.
  
     0.464
T459_29585
XS domain-containing protein.
  
     0.463
T459_35100
F-box domain-containing protein.
  
     0.452
T459_28644
XS domain-containing protein.
  
     0.449
T459_12612
F-box domain-containing protein.
  
  
  0.447
T459_03651
F-box domain-containing protein.
  
     0.446
T459_13293
Uncharacterized protein.
  
    0.445
T459_29272
F-box domain-containing protein.
  
     0.442
T459_05162
F-box domain-containing protein.
  
     0.440
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.