STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26208Cytochrome 98A1. (302 aa)    
Predicted Functional Partners:
T459_22629
Flavonol synthase/flavanone 3-hydroxylase.
      
 0.571
SIG4
Oxalate--CoA ligase.
    
 0.566
T459_20572
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.526
T459_20296
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.524
T459_20568
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.523
T459_20297
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.522
T459_25173
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.520
T459_08521
Naringenin,2-oxoglutarate 3-dioxygenase.
      
 0.520
T459_08960
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
  
  0.519
T459_20574
11-oxo-beta-amyrin 30-oxidase; Belongs to the cytochrome P450 family.
  
  
  0.517
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.