STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_26331Uncharacterized protein; Belongs to the disease resistance NB-LRR family. (770 aa)    
Predicted Functional Partners:
T459_12541
FRIGIDA-like protein; Belongs to the Frigida family.
  
 
  0.503
T459_30491
FRIGIDA-like protein; Belongs to the Frigida family.
  
 
  0.483
T459_18077
FRIGIDA-like protein; Belongs to the Frigida family.
  
 
  0.477
T459_29585
XS domain-containing protein.
  
     0.467
T459_12069
Uncharacterized protein.
  
     0.449
T459_32634
Uncharacterized protein.
  
     0.449
T459_09731
Transmembrane NAC transcription factor 1.
  
    0.446
T459_00141
DUF295 domain-containing protein.
  
     0.445
T459_03651
F-box domain-containing protein.
  
     0.445
T459_22912
Uncharacterized protein.
  
     0.443
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.