STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_22487DUF4378 domain-containing protein. (492 aa)    
Predicted Functional Partners:
T459_09326
Uncharacterized protein.
  
     0.532
T459_21670
Uncharacterized protein.
      
 0.521
T459_34135
Uncharacterized protein.
  
     0.520
T459_22853
Jas domain-containing protein.
  
     0.517
T459_13669
Uncharacterized protein.
  
     0.516
T459_21986
RING-type domain-containing protein.
  
     0.513
T459_28704
Uncharacterized protein.
  
     0.510
T459_07024
Lamin-like protein.
  
     0.509
T459_02202
Uncharacterized protein.
  
     0.508
T459_16772
Uncharacterized protein.
  
     0.504
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.