STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_22376CAAX prenyl protease 2. (230 aa)    
Predicted Functional Partners:
T459_21836
CAAX prenyl protease; Proteolytically removes the C-terminal three residues of farnesylated proteins; Belongs to the peptidase M48A family.
    
 0.987
T459_06868
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
    
 0.987
T459_17984
Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha.
     
 0.986
T459_14161
Protein-S-isoprenylcysteine O-methyltransferase.
   
 0.956
T459_04664
Putative isoprenylcysteine alpha-carbonyl methylesterase ICMEL1.
     
 0.923
T459_26968
Putative isoprenylcysteine alpha-carbonyl methylesterase ICMEL1.
     
 0.923
T459_09199
Peptidase_M48 domain-containing protein.
    
 
 0.753
T459_34669
Peptidase_M48 domain-containing protein.
    
 
 0.753
T459_01061
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
   0.749
T459_22157
Arsenate reductase 2.1.
     
 0.723
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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