STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_23064Uncharacterized protein. (113 aa)    
Predicted Functional Partners:
T459_29643
ACT domain-containing protein ACR6.
  
     0.522
T459_31183
Uncharacterized protein.
  
     0.509
T459_16391
Uncharacterized protein.
  
     0.480
T459_11027
Histidine-containing phosphotransfer protein 4.
  
     0.480
T459_28889
Histidine-containing phosphotransfer protein 4.
  
     0.474
T459_30872
Pleiotropic drug resistance protein 1.
  
     0.470
T459_25716
Uncharacterized protein.
  
    0.469
T459_20620
Squamosa promoter-binding-like protein 3.
  
     0.464
T459_30823
Uncharacterized protein.
  
    0.463
T459_25478
Uncharacterized protein.
  
 
  0.454
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.