STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_21991Uncharacterized protein. (1885 aa)    
Predicted Functional Partners:
T459_13098
Uncharacterized protein.
    
 
 0.574
T459_19800
Uncharacterized protein.
    
 
 0.563
T459_32876
Uncharacterized protein.
      
 0.562
T459_06891
PigN domain-containing protein.
      
 0.518
T459_03147
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
   
 
 0.503
T459_06158
CNH domain-containing protein.
      
 0.497
T459_31905
Uncharacterized protein.
   
    0.463
T459_31908
Uncharacterized protein.
   
    0.463
T459_23198
Uncharacterized protein.
   
  
 0.455
T459_16872
Uncharacterized protein.
   
  
 0.455
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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