STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_19374FHA domain-containing protein. (875 aa)    
Predicted Functional Partners:
T459_00157
AB hydrolase-1 domain-containing protein.
   
 0.937
T459_15953
YL1_C domain-containing protein.
   
 0.937
T459_28779
RuvB-like helicase; Belongs to the RuvB family.
    
 0.921
T459_16367
Actin-related protein 5; Belongs to the actin family.
    
 0.907
T459_07853
Actin-related protein 9; Belongs to the actin family.
    
 0.907
T459_28344
Uncharacterized protein.
    
 0.878
T459_09019
Uncharacterized protein.
    
  0.846
T459_23302
Ubiquitin carboxyl-terminal hydrolase.
   
  0.805
T459_28175
Uncharacterized protein.
   
  0.756
T459_28176
Uncharacterized protein.
   
  0.756
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.