STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_20700Bulb-type lectin domain-containing protein. (186 aa)    
Predicted Functional Partners:
T459_30305
Uncharacterized protein.
  
 
  0.542
T459_21663
Uncharacterized protein.
  
 
  0.542
T459_19601
Uncharacterized protein.
  
 
  0.533
T459_05203
Floral homeotic protein AGAMOUS.
  
  
  0.530
T459_18526
AAI domain-containing protein; Belongs to the plant LTP family.
  
 
  0.527
T459_05695
C2 domain-containing protein.
  
 
  0.527
T459_21786
Uncharacterized protein.
  
 
  0.519
T459_19968
Uncharacterized protein.
  
 
  0.518
T459_35642
Uncharacterized protein.
  
 
  0.507
T459_24407
NB-ARC domain-containing protein.
  
     0.506
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.