STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_21019G2/mitotic-specific cyclin S13-6; Belongs to the cyclin family. (210 aa)    
Predicted Functional Partners:
T459_08290
Wee1-like protein kinase.
   
 0.724
T459_03734
Cell division cycle 20.1, cofactor of APC complex.
  
 0.633
T459_03729
Cell division cycle 20.4, cofactor of APC complex.
  
 0.630
T459_22157
Arsenate reductase 2.1.
   
 0.572
T459_04129
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
   
 0.554
T459_27990
Ubiquitin-conjugating enzyme E2 C; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.550
T459_25520
Cyclin-dependent kinase B1-1; Belongs to the protein kinase superfamily.
   
 0.550
T459_17090
Myb family transcription factor APL.
   
 0.546
T459_22591
Uncharacterized protein.
   
 0.546
T459_00978
Myb family transcription factor APL.
   
 0.546
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.