Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
T459_15949Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (443 aa)    
Predicted Functional Partners:
T459_14687
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
  0.900
T459_29628
Phosphoglucan phosphatase DSP4, chloroplastic.
    
 0.632
T459_12048
Phosphoglucan phosphatase LSF1, chloroplastic.
    
 0.632
T459_28785
Serine/threonine-protein kinase GRIK2; Belongs to the protein kinase superfamily.
  
 
0.568
T459_24645
Calcineurin B-like protein 3.
    
 0.557
T459_20948
Calcineurin B-like protein 2.
    
 0.557
T459_08611
Calcineurin B-like protein 2.
    
 0.557
T459_15053
Homeobox domain-containing protein.
    
 
 0.556
T459_29380
Homeobox-leucine zipper protein HOX4.
    
 
 0.556
T459_34591
Calreticulin.
      
 0.543
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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