STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_16487Nuclear migration protein nudC. (286 aa)    
Predicted Functional Partners:
T459_10147
Uncharacterized protein.
   
 0.790
T459_14576
Centromere/kinetochore protein zw10-like protein.
     
 0.507
T459_20194
Mitotic checkpoint serine/threonine-protein kinase BUB1.
     
 0.497
T459_23240
TOG domain-containing protein.
     
 0.497
T459_23360
CLIP-associated protein.
     
 0.497
T459_15838
CLIP-associated protein.
     
 0.497
T459_16378
BUB1 N-terminal domain-containing protein.
     
 0.497
T459_13530
Mitotic spindle checkpoint protein BUBR1.
     
 0.497
T459_27755
Mitotic spindle checkpoint protein MAD2.
   
 
  0.494
T459_32504
Mitotic spindle checkpoint protein MAD1.
    
  0.494
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.