STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_17674Putative LRR receptor-like serine/threonine-protein kinase. (1042 aa)    
Predicted Functional Partners:
T459_26096
Alpha carbonic anhydrase 7.
   
  
 0.765
T459_15505
Small nuclear ribonucleoprotein G.
      
 0.596
T459_29728
Small nuclear ribonucleoprotein G.
      
 0.541
T459_09102
Hexose carrier protein HEX6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.529
PR4
Pathogenesis-related protein PR-4B.
   
  
 0.506
T459_09101
Hexose carrier protein HEX6; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.499
T459_25040
(3S,6E)-nerolidol synthase 1.
  
     0.416
T459_17064
AP2-like ethylene-responsive transcription factor BBM2.
    
 0.413
T459_34804
LOB domain-containing protein.
      
 0.408
T459_13878
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.402
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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