STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_1778060S ribosomal protein L17-1; Belongs to the universal ribosomal protein uL22 family. (156 aa)    
Predicted Functional Partners:
T459_21343
60S ribosomal protein L5.
  
 0.994
T459_18927
60S ribosomal protein L39-1.
   
 0.993
T459_03829
Ribosomal protein L37; Binds to the 23S rRNA.
  
 0.991
T459_29467
60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.991
T459_25687
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
 
 0.989
T459_18183
60S ribosomal protein L12; Belongs to the universal ribosomal protein uL11 family.
  
 0.988
T459_06570
60S ribosomal protein L23A.
  
 0.987
T459_28606
60S ribosomal protein L10a.
  
 0.986
T459_02259
60S ribosomal protein L10a.
  
 0.986
T459_04546
60S ribosomal protein L26.
  
 0.985
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.