STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_14388Putative ribose-5-phosphate isomerase 2. (271 aa)    
Predicted Functional Partners:
T459_26916
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
   
 
 0.959
T459_30581
6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic.
   
 
 0.959
T459_25378
Transketolase, chloroplastic.
   
 0.949
T459_14631
Transketolase, chloroplastic.
   
 0.949
T459_00963
Phosphoribulokinase.
   
 
 0.947
T459_03017
Phosphoglucomutase, cytoplasmic; Belongs to the phosphohexose mutase family.
  
 
 0.925
T459_02211
Phosphoglucomutase, cytoplasmic; Belongs to the phosphohexose mutase family.
  
 
 0.925
T459_20516
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.921
T459_25409
Ribose-phosphate pyrophosphokinase 1, chloroplastic.
  
 
 0.920
T459_00814
Ribose-phosphate pyrophosphokinase 2, chloroplastic.
  
 
 0.920
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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