Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T459_11694Floral homeotic protein APETALA 2. (495 aa)    
Predicted Functional Partners:
T459_14687
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
    
 0.600
T459_12888
Inositol-tetrakisphosphate 1-kinase; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3. Belongs to the ITPK1 family.
    
 0.588
T459_07441
Ethylene-responsive transcription factor.
  
   
 0.573
PTI1
AIEF1.
  
   
 0.567
T459_26911
Basic leucine zipper 43.
  
   
 0.536
T459_03262
Ethylene-responsive transcription factor 2.
  
   
 0.529
T459_28770
Homeobox-leucine zipper protein HOX10.
      
 0.524
T459_23472
Uncharacterized protein.
      
 0.524
T459_27844
Ethylene-responsive transcription factor LEP.
  
 
 
0.498
T459_14861
Ethylene-responsive transcription factor 1.
  
   
 0.481
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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