Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T459_12485LRRNT_2 domain-containing protein. (394 aa)    
Predicted Functional Partners:
T459_05033
Uncharacterized protein.
  
 
  0.594
T459_10986
Tyrosine-sulfated glycopeptide receptor 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.580
T459_06547
LRR receptor-like serine/threonine-protein kinase HSL2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.576
T459_08989
Protein STRUBBELIG-RECEPTOR FAMILY 2.
    
   0.569
T459_21514
Protein kinase domain-containing protein.
    
 
 0.555
T459_06546
Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
  0.548
T459_21172
Phytosulfokine receptor 1.
    
  0.546
T459_18381
Protein kinase domain-containing protein.
    
  0.546
T459_17253
Protein STRUBBELIG-RECEPTOR FAMILY 5.
    
  0.545
T459_05929
Protein STRUBBELIG-RECEPTOR FAMILY 6.
    
   0.536
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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