STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_13430Calcium-dependent protein kinase 29. (533 aa)    
Predicted Functional Partners:
T459_34097
Respiratory burst oxidase-like protein B.
   
 
 0.654
T459_33172
Respiratory burst oxidase-like protein D.
   
 
 0.654
T459_19323
Respiratory burst oxidase-like protein E.
   
 
 0.654
T459_10645
Respiratory burst oxidase-like protein C.
   
 
 0.654
T459_00187
Respiratory burst oxidase-like protein A.
   
 
 0.654
T459_22923
Uncharacterized protein.
   
 0.637
T459_10454
Putative calcium-binding protein CML30.
   
 0.633
T459_21740
Fidgetin-like protein 1; Belongs to the AAA ATPase family.
    
 
 0.562
T459_19059
Calmodulin-binding receptor-like cytoplasmic kinase 3.
  
 0.525
T459_06999
Putative calcium-binding protein CML30.
   
 0.507
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.