STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_08361Flavin-containing monooxygenase. (387 aa)    
Predicted Functional Partners:
T459_26473
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
  0.900
T459_04872
2-oxoglutarate-dependent dioxygenase DAO; Belongs to the iron/ascorbate-dependent oxidoreductase family.
     
  0.900
T459_10899
Aminotran_1_2 domain-containing protein.
     
  0.900
T459_25753
Amidase 1.
    
 0.785
T459_16870
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.699
T459_10137
Tryptophan aminotransferase-related protein 2.
     
 0.686
T459_32875
Tryptophan aminotransferase-related protein 2.
     
 0.686
T459_27780
Tryptophan aminotransferase-related protein 1.
     
 0.686
T459_03794
Tryptophan aminotransferase-related protein 2.
     
 0.686
T459_06407
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.684
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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