STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_08905PRK domain-containing protein. (311 aa)    
Predicted Functional Partners:
T459_33694
Pantoate--beta-alanine ligase.
     
 0.827
T459_23502
Uncharacterized protein.
     
 0.827
T459_00322
Phosphopantothenoylcysteine decarboxylase.
   
 
 0.809
T459_12596
Phosphopantothenate--cysteine ligase 2.
   
 
 0.809
T459_30506
Phosphopantothenate--cysteine ligase 2.
   
 
 0.809
T459_18502
Cytidine deaminase 1.
    
  0.687
T459_13180
Cytidine deaminase 1.
    
  0.687
T459_04231
FAD-binding PCMH-type domain-containing protein.
     
 0.589
T459_03815
Uncharacterized protein.
      
 0.562
T459_17667
CMP/dCMP-type deaminase domain-containing protein.
     
 0.556
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.