STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_09768Uncharacterized protein. (110 aa)    
Predicted Functional Partners:
T459_10433
Uncharacterized protein.
  
     0.490
T459_33748
Uncharacterized protein.
  
     0.485
T459_33744
Auxin-induced protein 15A.
  
     0.481
T459_33745
Auxin-induced protein 6B.
  
     0.479
T459_07620
Uncharacterized protein.
  
     0.474
T459_33747
Uncharacterized protein.
  
     0.468
T459_27098
J domain-containing protein.
  
     0.467
Upa4
Uncharacterized protein.
  
     0.467
T459_31133
Remorin_C domain-containing protein.
  
     0.466
T459_27088
J domain-containing protein.
  
     0.462
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.