STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_09847Cysteine proteinase inhibitor 6. (1145 aa)    
Predicted Functional Partners:
T459_20778
RNA helicase.
   
 
 0.950
T459_17209
Sas10 domain-containing protein.
   
 
 0.940
T459_06150
NUC153 domain-containing protein.
   
   0.926
T459_17959
Uncharacterized protein.
   
 
 0.925
T459_04994
Uncharacterized protein.
   
   0.923
T459_22529
WD_REPEATS_REGION domain-containing protein.
   
   0.914
T459_22651
WD_REPEATS_REGION domain-containing protein.
   
   0.914
T459_20541
Uncharacterized protein.
   
   0.904
T459_12685
Uncharacterized protein.
   
   0.904
T459_15298
CBF domain-containing protein.
   
   0.898
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.