STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_10245Short-chain dehydrogenase reductase 5. (265 aa)    
Predicted Functional Partners:
T459_00605
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
   
 
 0.646
T459_23046
Tropinone reductase 2.
  
     0.514
T459_03114
Uncharacterized protein.
  
 0.511
T459_03364
Putative acyl-carrier-protein S-malonyltransferase/ transferase.
  
 
 0.448
T459_22948
Tropinone reductase-like protein.
  
     0.443
T459_17891
Putative 3,4-dihydroxy-2-butanone kinase.
   
 0.426
T459_01837
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic.
   
 
 0.426
T459_33257
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.424
T459_30134
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.419
T459_22245
DNA-damage-repair/toleration protein.
  
 
 0.413
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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