STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_00036Embryogenesis-associated protein EMB8. (278 aa)    
Predicted Functional Partners:
T459_12062
Aminotran_1_2 domain-containing protein.
   
  
 0.570
T459_21780
Riboflavin biosynthesis protein PYRD, chloroplastic.
      
 0.532
T459_12994
Zinc finger protein ZAT10.
      
 0.514
T459_23184
Auxin transporter-like protein 1.
   
  
 0.512
T459_25508
Auxin transporter-like protein 1.
   
  
 0.512
T459_11034
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
      
 0.472
T459_18856
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.465
T459_20775
1-acyl-sn-glycerol-3-phosphate acyltransferase.
    
  0.465
T459_15197
Uncharacterized protein.
      
 0.436
T459_19825
Threonine--tRNA ligase.
      
 0.435
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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