STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_00531WW domain-containing protein. (669 aa)    
Predicted Functional Partners:
T459_08218
Small nuclear ribonucleoprotein Sm D2.
    
 0.954
T459_32636
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.952
T459_26367
Small nuclear ribonucleoprotein F.
    
  0.952
T459_32052
Uncharacterized protein.
  
  
 
0.903
T459_21787
Small nuclear ribonucleoprotein-associated protein.
    
 0.876
T459_29728
Small nuclear ribonucleoprotein G.
    
  0.733
T459_15505
Small nuclear ribonucleoprotein G.
    
  0.733
T459_25015
Putative small nuclear ribonucleoprotein G.
    
  0.733
T459_19166
Putative small nuclear ribonucleoprotein G.
    
  0.733
T459_12765
Putative small nuclear ribonucleoprotein G.
    
  0.733
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.