STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_00792Uncharacterized protein. (891 aa)    
Predicted Functional Partners:
T459_00790
PH domain-containing protein.
 
    
0.856
T459_09614
Protein DEFECTIVE IN MERISTEM SILENCING 3.
  
     0.527
T459_08609
Uncharacterized protein.
  
  
 0.527
T459_09617
Protein DEFECTIVE IN MERISTEM SILENCING 3.
  
     0.520
T459_33031
Uncharacterized protein.
  
  
 0.510
T459_09521
Uncharacterized protein.
  
     0.499
T459_12130
Dynamin-2B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
     0.498
T459_16723
Uncharacterized protein.
  
     0.486
T459_32496
Dynamin-2B; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
  
     0.478
T459_15199
Uncharacterized protein.
  
   
 0.471
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.