STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_01164Polyphenol oxidase B, chloroplastic. (594 aa)    
Predicted Functional Partners:
TDC2
Tyrosine decarboxylase 1.
     
  0.900
T459_20058
Tyrosine/DOPA decarboxylase 3.
     
  0.900
TDC1
Tyrosine/DOPA decarboxylase 3.
     
  0.900
T459_14062
Histidinol-phosphate aminotransferase, chloroplastic.
     
  0.900
T459_05687
Polyphenol oxidase, chloroplastic.
  
  
 
0.669
T459_03860
Uncharacterized protein.
  
  
 
0.656
T459_06784
Catechol oxidase B, chloroplastic.
  
  
 
0.654
T459_01178
Polyphenol oxidase F, chloroplastic.
  
  
 
0.654
T459_24718
Tyrosine aminotransferase.
   
 
  0.652
T459_30259
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase.
   
 
  0.652
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.