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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_01335Shaggy-related protein kinase theta; Belongs to the protein kinase superfamily. (471 aa)    
Predicted Functional Partners:
T459_14687
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein.
   
 0.784
T459_07804
ASCH domain-containing protein.
    
 0.539
T459_26924
CYTH domain-containing protein.
    
 0.533
T459_14762
PRK domain-containing protein.
    
 0.533
T459_10314
CYTH domain-containing protein.
    
 0.533
T459_28589
Uncharacterized protein.
     
 0.503
T459_18058
Uncharacterized protein.
     
 0.503
T459_22326
Uncharacterized protein.
     
 0.503
T459_28030
Dihydropyrimidinase.
    
 0.473
T459_05629
Allantoinase.
    
 0.473
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.