STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_02022C2H2-type domain-containing protein. (173 aa)    
Predicted Functional Partners:
T459_32622
GRAM domain-containing protein.
  
     0.488
T459_14953
FLZ-type domain-containing protein.
  
     0.481
T459_05946
Uncharacterized protein.
  
     0.481
T459_32808
Uncharacterized protein.
  
     0.472
T459_05648
Uncharacterized protein.
  
     0.468
T459_22961
Uncharacterized protein.
  
     0.458
T459_17912
Transcription factor bHLH49.
  
     0.453
T459_33668
Uncharacterized protein.
  
     0.443
T459_22127
ETHYLENE INSENSITIVE 3-like 1 protein.
  
     0.439
T459_26855
Transcription factor PERIANTHIA.
  
     0.435
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.