STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_03619LRRNT_2 domain-containing protein. (380 aa)    
Predicted Functional Partners:
T459_13832
BURP domain-containing protein.
  
 
  0.511
T459_14982
Uncharacterized protein.
  
     0.507
T459_06794
LRRNT_2 domain-containing protein.
  
 
  0.502
T459_04494
Uncharacterized protein.
  
     0.495
T459_11486
Uncharacterized protein.
  
     0.451
T459_25560
Uncharacterized protein.
  
 
   0.450
T459_11194
Uncharacterized protein.
  
    0.450
T459_11430
Uncharacterized protein.
  
     0.449
T459_11467
Uncharacterized protein.
  
     0.449
T459_11934
Uncharacterized protein.
  
     0.431
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.