STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_03675Uncharacterized protein. (178 aa)    
Predicted Functional Partners:
T459_02021
Uncharacterized protein.
  
 
  0.583
T459_18532
Uncharacterized protein.
  
 
  0.577
T459_33284
NAC transcription factor 25.
  
 
  0.553
T459_25694
HTH myb-type domain-containing protein.
  
 
  0.546
T459_11724
Uncharacterized protein.
  
 
  0.543
T459_26393
Induced stolon tip protein LRP.
  
  
  0.540
T459_10034
Uncharacterized protein.
  
 
  0.539
T459_16178
Uncharacterized protein.
  
 
  0.538
T459_34490
Uncharacterized protein.
  
 
  0.537
T459_05606
Glutaredoxin domain-containing protein.
  
     0.536
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.