STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T459_10609Putative hydroxycinnamoyl transferase. (435 aa)    
Predicted Functional Partners:
T459_00968
4-coumarate--CoA ligase-like 3.
    
 0.958
T459_28675
4-coumarate--CoA ligase-like 7.
    
 0.957
T459_18415
Candidate cinnamic acid 4-hydroxylase; Belongs to the cytochrome P450 family.
   
 
 0.957
T459_09786
4-coumarate--CoA ligase 1.
   
 0.955
T459_10850
Caffeoylshikimate esterase.
   
 
 0.954
T459_15240
Chalcone synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
   
 0.954
T459_05482
Caffeoyl-CoA O-methyltransferase.
   
 
 0.953
T459_05480
Caffeoyl-CoA O-methyltransferase.
   
 
 0.953
T459_33541
Putative caffeoyl-CoA 3-O-methyltransferase.
   
 
 0.953
T459_10548
Cinnamoyl-CoA reductase 2.
   
 0.952
Your Current Organism:
Capsicum annuum
NCBI taxonomy Id: 4072
Other names: C. annuum, Capsicum annuum L., Capsicum sp. HD-HW, Capsicum sp. JYM-2013
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