Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS50018.1 | SIS50027.1 | SAMN05421795_101116 | SAMN05421795_101117 | LysM domain-containing protein. | Hypothetical protein; Belongs to the LOG family. | 0.774 |
SIS50018.1 | SIS77412.1 | SAMN05421795_101116 | SAMN05421795_104127 | LysM domain-containing protein. | ATP-binding cassette, subfamily B. | 0.476 |
SIS50027.1 | SIS50018.1 | SAMN05421795_101117 | SAMN05421795_101116 | Hypothetical protein; Belongs to the LOG family. | LysM domain-containing protein. | 0.774 |
SIS50027.1 | SIS77412.1 | SAMN05421795_101117 | SAMN05421795_104127 | Hypothetical protein; Belongs to the LOG family. | ATP-binding cassette, subfamily B. | 0.430 |
SIS50027.1 | SIS87591.1 | SAMN05421795_101117 | SAMN05421795_108124 | Hypothetical protein; Belongs to the LOG family. | Glutamate synthase (NADPH) large subunit. | 0.477 |
SIS50027.1 | prmC | SAMN05421795_101117 | SAMN05421795_101112 | Hypothetical protein; Belongs to the LOG family. | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.644 |
SIS77412.1 | SIS50018.1 | SAMN05421795_104127 | SAMN05421795_101116 | ATP-binding cassette, subfamily B. | LysM domain-containing protein. | 0.476 |
SIS77412.1 | SIS50027.1 | SAMN05421795_104127 | SAMN05421795_101117 | ATP-binding cassette, subfamily B. | Hypothetical protein; Belongs to the LOG family. | 0.430 |
SIS87591.1 | SIS50027.1 | SAMN05421795_108124 | SAMN05421795_101117 | Glutamate synthase (NADPH) large subunit. | Hypothetical protein; Belongs to the LOG family. | 0.477 |
prmC | SIS50027.1 | SAMN05421795_101112 | SAMN05421795_101117 | [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | Hypothetical protein; Belongs to the LOG family. | 0.644 |