Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS50698.1 | SIS50705.1 | SAMN05421795_101176 | SAMN05421795_101177 | Hypothetical protein; Belongs to the UPF0260 family. | FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family. | 0.876 |
SIS50698.1 | SIS50718.1 | SAMN05421795_101176 | SAMN05421795_101178 | Hypothetical protein; Belongs to the UPF0260 family. | 3-hydroxybutyryl-CoA dehydratase. | 0.808 |
SIS50705.1 | SIS50698.1 | SAMN05421795_101177 | SAMN05421795_101176 | FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family. | Hypothetical protein; Belongs to the UPF0260 family. | 0.876 |
SIS50705.1 | SIS50718.1 | SAMN05421795_101177 | SAMN05421795_101178 | FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family. | 3-hydroxybutyryl-CoA dehydratase. | 0.808 |
SIS50718.1 | SIS50698.1 | SAMN05421795_101178 | SAMN05421795_101176 | 3-hydroxybutyryl-CoA dehydratase. | Hypothetical protein; Belongs to the UPF0260 family. | 0.808 |
SIS50718.1 | SIS50705.1 | SAMN05421795_101178 | SAMN05421795_101177 | 3-hydroxybutyryl-CoA dehydratase. | FMN adenylyltransferase /riboflavin kinase; Belongs to the ribF family. | 0.808 |
SIS50718.1 | SIS54307.1 | SAMN05421795_101178 | SAMN05421795_101444 | 3-hydroxybutyryl-CoA dehydratase. | Polyhydroxyalkanoate synthase. | 0.943 |
SIS50718.1 | SIS54612.1 | SAMN05421795_101178 | SAMN05421795_101466 | 3-hydroxybutyryl-CoA dehydratase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.938 |
SIS50718.1 | SIS65048.1 | SAMN05421795_101178 | SAMN05421795_102162 | 3-hydroxybutyryl-CoA dehydratase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.923 |
SIS50718.1 | SIS65169.1 | SAMN05421795_101178 | SAMN05421795_102174 | 3-hydroxybutyryl-CoA dehydratase. | 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.880 |
SIS50718.1 | SIS82609.1 | SAMN05421795_101178 | SAMN05421795_10680 | 3-hydroxybutyryl-CoA dehydratase. | Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.913 |
SIS50718.1 | SIS83442.1 | SAMN05421795_101178 | SAMN05421795_106172 | 3-hydroxybutyryl-CoA dehydratase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.881 |
SIS50718.1 | SIS86589.1 | SAMN05421795_101178 | SAMN05421795_10818 | 3-hydroxybutyryl-CoA dehydratase. | crotonyl-CoA carboxylase/reductase. | 0.926 |
SIS50718.1 | SIS89097.1 | SAMN05421795_101178 | SAMN05421795_10993 | 3-hydroxybutyryl-CoA dehydratase. | Polyhydroxyalkanoate synthase. | 0.929 |
SIS54307.1 | SIS50718.1 | SAMN05421795_101444 | SAMN05421795_101178 | Polyhydroxyalkanoate synthase. | 3-hydroxybutyryl-CoA dehydratase. | 0.943 |
SIS54307.1 | SIS54612.1 | SAMN05421795_101444 | SAMN05421795_101466 | Polyhydroxyalkanoate synthase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.909 |
SIS54307.1 | SIS65048.1 | SAMN05421795_101444 | SAMN05421795_102162 | Polyhydroxyalkanoate synthase. | 3-oxoacyl-[acyl-carrier-protein] reductase. | 0.982 |
SIS54307.1 | SIS89097.1 | SAMN05421795_101444 | SAMN05421795_10993 | Polyhydroxyalkanoate synthase. | Polyhydroxyalkanoate synthase. | 0.865 |
SIS54612.1 | SIS50718.1 | SAMN05421795_101466 | SAMN05421795_101178 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxybutyryl-CoA dehydratase. | 0.938 |
SIS54612.1 | SIS54307.1 | SAMN05421795_101466 | SAMN05421795_101444 | 3-hydroxyacyl-CoA dehydrogenase. | Polyhydroxyalkanoate synthase. | 0.909 |
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