STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS55439.1Mannose ABC transporter ATP-binding protein. (258 aa)    
Predicted Functional Partners:
SIS55398.1
Mannose-binding protein /fructose-binding protein /ribose-binding protein.
 
 0.999
SIS55408.1
Fructose transport system permease protein.
 
 0.988
SIS55426.1
Fructose transport system permease protein.
 
 0.988
SIS91855.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 0.890
SIS55383.1
Transcriptional regulator, MarR family.
 
   
 0.847
SIS57887.1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.790
SIS91845.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
 0.761
SIS57900.1
Xylose-binding protein.
 
 0.708
Your Current Organism:
Rhodobacter vinaykumarii
NCBI taxonomy Id: 407234
Other names: CCUG 54311, DSM 18714, JCM 14544, R. vinaykumarii, Rhodobacter vinaykumarii Srinivas et al. 2007, strain JA123
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.