STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS76967.1Hypothetical protein. (249 aa)    
Predicted Functional Partners:
SIS76973.1
ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component.
 
     0.952
SIS76986.1
Hypothetical protein.
 
     0.890
SIS77025.1
RNA polymerase sigma-70 factor, ECF subfamily.
 
     0.875
SIS76927.1
Hypothetical protein.
 
     0.861
SIS76896.1
Predicted P-loop ATPase and inactivated derivatives.
 
     0.849
SIS76907.1
Exodeoxyribonuclease-5.
 
     0.811
SIS76868.1
Hypothetical protein.
 
     0.788
SIS76876.1
Hypothetical protein.
 
     0.768
SIS77075.1
Hypothetical protein.
 
     0.695
SIS76856.1
DNA modification methylase.
 
     0.692
Your Current Organism:
Rhodobacter vinaykumarii
NCBI taxonomy Id: 407234
Other names: CCUG 54311, DSM 18714, JCM 14544, R. vinaykumarii, Rhodobacter vinaykumarii Srinivas et al. 2007, strain JA123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.