STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS80285.1iron(III) transport system substrate-binding protein. (348 aa)    
Predicted Functional Partners:
SIS77350.1
iron(III) transport system permease protein.
 
 
 0.988
SIS51618.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.962
SIS74197.1
iron(III) transport system permease protein.
 
 
 0.881
SIS74189.1
iron(III) transport system substrate-binding protein.
  
  
 0.877
SIS67368.1
Imelysin. Metallo peptidase. MEROPS family M75.
  
    0.874
SIS74177.1
iron(III) transport system ATP-binding protein.
 
 
 0.627
SIS87192.1
Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.627
SIS89592.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.613
SIS64193.1
Thiamine transport system permease protein.
  
 
 0.593
SIS52417.1
Chemotaxis protein MotB.
    
   0.581
Your Current Organism:
Rhodobacter vinaykumarii
NCBI taxonomy Id: 407234
Other names: CCUG 54311, DSM 18714, JCM 14544, R. vinaykumarii, Rhodobacter vinaykumarii Srinivas et al. 2007, strain JA123
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