STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS85528.1FAD/FMN-containing dehydrogenase. (481 aa)    
Predicted Functional Partners:
SIS85557.1
L-threonine synthase.
  
 
 0.808
SIS85549.1
Predicted Zn-dependent peptidase; Belongs to the peptidase M16 family.
    
  0.804
SIS85541.1
Ribosomal-protein-alanine N-acetyltransferase.
       0.783
SIS87591.1
Glutamate synthase (NADPH) large subunit.
    
 0.736
SIS74260.1
L-lactate dehydrogenase (cytochrome).
 
 0.718
SIS64297.1
Glycolate oxidase FAD binding subunit.
  
 
0.656
SIS64307.1
Glycolate oxidase iron-sulfur subunit.
 
 0.629
SIS55199.1
4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.
    
 0.604
SIS83061.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.600
pdhA
Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.572
Your Current Organism:
Rhodobacter vinaykumarii
NCBI taxonomy Id: 407234
Other names: CCUG 54311, DSM 18714, JCM 14544, R. vinaykumarii, Rhodobacter vinaykumarii Srinivas et al. 2007, strain JA123
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.