STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS88895.1Cation diffusion facilitator family transporter. (199 aa)    
Predicted Functional Partners:
SIS88879.1
Cobalt-zinc-cadmium efflux system protein.
 
 
 0.863
SIS88889.1
Transglutaminase-like superfamily protein.
 
    0.822
SIS88906.1
Cu(I)-responsive transcriptional regulator.
 
   
 0.697
lnt-2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
 
     0.614
SIS77567.1
Cu+-exporting ATPase.
  
  
 0.584
SIS88957.1
Peptidase family M23.
 
     0.564
SIS88930.1
Thioredoxin.
 
     0.527
SIS88923.1
Disulfide bond formation protein DsbB; Belongs to the DsbB family.
 
     0.501
SIS88972.1
Zinc transporter, ZIP family.
   
 0.485
SIS88940.1
Hypothetical protein.
 
     0.476
Your Current Organism:
Rhodobacter vinaykumarii
NCBI taxonomy Id: 407234
Other names: CCUG 54311, DSM 18714, JCM 14544, R. vinaykumarii, Rhodobacter vinaykumarii Srinivas et al. 2007, strain JA123
Server load: low (16%) [HD]