Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS92380.1 | SIS92390.1 | SAMN05421795_1146 | SAMN05421795_1147 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.773 |
SIS92380.1 | SIS92398.1 | SAMN05421795_1146 | SAMN05421795_1148 | Type IV secretion system protein VirD4. | Relaxasome subunit MobC. | 0.774 |
SIS92380.1 | SIS92406.1 | SAMN05421795_1146 | SAMN05421795_1149 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.773 |
SIS92380.1 | SIS92413.1 | SAMN05421795_1146 | SAMN05421795_11410 | Type IV secretion system protein VirD4. | Ti-type conjugative transfer relaxase TraA. | 0.432 |
SIS92380.1 | SIS92422.1 | SAMN05421795_1146 | SAMN05421795_11411 | Type IV secretion system protein VirD4. | Hypothetical protein. | 0.400 |
SIS92390.1 | SIS92380.1 | SAMN05421795_1147 | SAMN05421795_1146 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.773 |
SIS92390.1 | SIS92398.1 | SAMN05421795_1147 | SAMN05421795_1148 | Hypothetical protein. | Relaxasome subunit MobC. | 0.773 |
SIS92390.1 | SIS92406.1 | SAMN05421795_1147 | SAMN05421795_1149 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SIS92390.1 | SIS92413.1 | SAMN05421795_1147 | SAMN05421795_11410 | Hypothetical protein. | Ti-type conjugative transfer relaxase TraA. | 0.426 |
SIS92390.1 | SIS92422.1 | SAMN05421795_1147 | SAMN05421795_11411 | Hypothetical protein. | Hypothetical protein. | 0.400 |
SIS92398.1 | SIS92380.1 | SAMN05421795_1148 | SAMN05421795_1146 | Relaxasome subunit MobC. | Type IV secretion system protein VirD4. | 0.774 |
SIS92398.1 | SIS92390.1 | SAMN05421795_1148 | SAMN05421795_1147 | Relaxasome subunit MobC. | Hypothetical protein. | 0.773 |
SIS92398.1 | SIS92406.1 | SAMN05421795_1148 | SAMN05421795_1149 | Relaxasome subunit MobC. | Hypothetical protein. | 0.773 |
SIS92398.1 | SIS92413.1 | SAMN05421795_1148 | SAMN05421795_11410 | Relaxasome subunit MobC. | Ti-type conjugative transfer relaxase TraA. | 0.426 |
SIS92398.1 | SIS92422.1 | SAMN05421795_1148 | SAMN05421795_11411 | Relaxasome subunit MobC. | Hypothetical protein. | 0.400 |
SIS92406.1 | SIS92380.1 | SAMN05421795_1149 | SAMN05421795_1146 | Hypothetical protein. | Type IV secretion system protein VirD4. | 0.773 |
SIS92406.1 | SIS92390.1 | SAMN05421795_1149 | SAMN05421795_1147 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SIS92406.1 | SIS92398.1 | SAMN05421795_1149 | SAMN05421795_1148 | Hypothetical protein. | Relaxasome subunit MobC. | 0.773 |
SIS92406.1 | SIS92413.1 | SAMN05421795_1149 | SAMN05421795_11410 | Hypothetical protein. | Ti-type conjugative transfer relaxase TraA. | 0.426 |
SIS92406.1 | SIS92422.1 | SAMN05421795_1149 | SAMN05421795_11411 | Hypothetical protein. | Hypothetical protein. | 0.400 |
page 1 of 2