Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0025Polysulfide reductase NrfD. (338 aa)    
Predicted Functional Partners:
THII_0026
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 0.941
THII_0024
Molecular chaperone TorD.
 
     0.936
THII_0027
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.912
THII_0023
Hypothetical protein.
       0.728
THII_1676
Hypothetical protein.
  
   
 0.602
THII_3705
D-alanyl-glycyl endopeptidase-like protein.
  
     0.561
THII_3262
Anaerobic dimethyl sulfoxide reductase subunit B.
 
  
 0.524
THII_0621
Sulfur oxidation protein DsrO.
 
  
 0.482
THII_1308
HNH endonuclease.
  
     0.458
THII_3453
HNH endonuclease.
  
     0.444
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.