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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0028Glycosyl transferase. (281 aa)    
Predicted Functional Partners:
THII_1139
Hypothetical protein.
  
     0.582
pheS
phenylalanyl-tRNA synthetase, alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.
 
     0.556
THII_0030
Sel1 domain-containing protein.
  
   0.478
THII_1539
Undecaprenyl-phosphate glucose phosphotransferase.
 
  
 0.454
THII_2638
Glycosyl transferase family protein.
     0.452
THII_0185
Glycosyl transferase, family 2.
 
     0.451
THII_1912
Glycosyltransferase.
 
     0.442
THII_2414
Hypothetical protein.
 
 
    0.424
THII_0716
Putative glycosyltransferase.
    
0.405
THII_1698
NAD-dependent epimerase/dehydratase.
 
  
 0.404
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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