rnt protein (Thioploca ingrica) - STRING interaction network

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rnt

Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis. (210 aa)

Predicted Functional Partners:

pyrC

0.808

kdsA

0.702

zipA

0.697

hflD

0.690

THII_0250

0.636

THII_0850

0.599

THII_3365

0.583

THII_3049

0.554

THII_3516

0.505

polA

0.490

Your Current Organism:

Thioploca ingrica

NCBI taxonomy Id: 40754
Other names: T. ingrica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THII_0250	hflD	THII_0250	THII_2714	Hypothetical protein; Belongs to the UPF0149 family.	Uncharacterized protein involved in purine metabolism.	0.571
THII_0250	rnt	THII_0250	THII_0067	Hypothetical protein; Belongs to the UPF0149 family.	Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.	0.636
THII_0250	zipA	THII_0250	THII_0641	Hypothetical protein; Belongs to the UPF0149 family.	Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.	0.634
THII_0850	THII_3049	THII_0850	THII_3049	Stringent starvation protein B.	DNA polymerase III subunit delta.	0.725
THII_0850	THII_3365	THII_0850	THII_3365	Stringent starvation protein B.	Hypothetical protein.	0.699
THII_0850	THII_3516	THII_0850	THII_3516	Stringent starvation protein B.	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.	0.606
THII_0850	rnt	THII_0850	THII_0067	Stringent starvation protein B.	Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.	0.599
THII_0850	zipA	THII_0850	THII_0641	Stringent starvation protein B.	Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.	0.558
THII_3049	THII_0850	THII_3049	THII_0850	DNA polymerase III subunit delta.	Stringent starvation protein B.	0.725
THII_3049	THII_3365	THII_3049	THII_3365	DNA polymerase III subunit delta.	Hypothetical protein.	0.739
THII_3049	THII_3516	THII_3049	THII_3516	DNA polymerase III subunit delta.	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.	0.717
THII_3049	polA	THII_3049	THII_1270	DNA polymerase III subunit delta.	DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.538
THII_3049	rnt	THII_3049	THII_0067	DNA polymerase III subunit delta.	Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.	0.554
THII_3365	THII_0850	THII_3365	THII_0850	Hypothetical protein.	Stringent starvation protein B.	0.699
THII_3365	THII_3049	THII_3365	THII_3049	Hypothetical protein.	DNA polymerase III subunit delta.	0.739
THII_3365	THII_3516	THII_3365	THII_3516	Hypothetical protein.	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.	0.723
THII_3365	rnt	THII_3365	THII_0067	Hypothetical protein.	Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.	0.583
THII_3365	zipA	THII_3365	THII_0641	Hypothetical protein.	Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.	0.413
THII_3516	THII_0850	THII_3516	THII_0850	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.	Stringent starvation protein B.	0.606
THII_3516	THII_3049	THII_3516	THII_3049	Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.	DNA polymerase III subunit delta.	0.717

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