Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THII_0085Hypothetical protein. (83 aa)    
Predicted Functional Partners:
THII_1110
Hypothetical protein.
  
     0.747
THII_0918
ATPase.
  
     0.746
THII_2514
SMC domain-containing protein.
  
     0.741
THII_1764
Hypothetical protein.
  
     0.672
THII_3575
Hypothetical protein.
 
     0.539
THII_1111
Hypothetical protein.
 
     0.492
THII_0084
Glycosyltransferase involved in cell wall biogenesis.
       0.480
THII_0011
Hypothetical protein.
  
     0.475
THII_2901
Thioesterase.
  
     0.418
THII_0010
ASPIC/UnbV domain-containing protein.
  
     0.415
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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