STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THII_0118Glutamate synthase, domain 2. (145 aa)    
Predicted Functional Partners:
THII_3058
Glutamate synthase.
 
 0.995
THII_3690
NADPH-dependent glutamate synthase beta chain - like protein.
 
 0.968
THII_3728
Glutamate synthase.
  
 
 0.912
THII_0619
Protein involved in sulfur oxidation DsrL.
 
 0.896
THII_2278
Heterodisulfide reductase subunit A.
   
   0.812
THII_0778
Pyridine nucleotide-disulfide oxidoreductase family.
  
 
 0.799
THII_2554
Formylmethanofuran dehydrogenase subunit A.
  
   0.657
THII_1394
Formylmethanofuran dehydrogenase subunit B.
  
 
 0.645
THII_1807
Nitrogenase molybdenum-iron protein alpha chain.
   
    0.640
nifH
Nitrogenase iron protein; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
   
  
 0.615
Your Current Organism:
Thioploca ingrica
NCBI taxonomy Id: 40754
Other names: T. ingrica
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